bridge.services.europe_pmc package

bridge.services.europe_pmc package#

Public Interface#

This section documents user-facing interface of the bridge.services.europe_pmc package (as defined in its __init__.py file).

Classes#

EuropePMCIngestor([pmid, pmcid, doi])

Ingest a publication record from Europe PMC using one or more identifiers.

Europe PMC integrations: async metadata ingestor from Europe PMC.

class bridge.services.europe_pmc.EuropePMCIngestor(pmid=None, pmcid=None, doi=None)[source]#

Bases: Ingestor

Ingest a publication record from Europe PMC using one or more identifiers.

Parameters:

  • pmid (str, optional) – PubMed identifier (e.g., “36173614”).

  • pmcid (str, optional) – PubMed Central identifier (e.g., “PMC9903320”).

  • doi (str, optional) – Digital Object Identifier (e.g., “10.1021/acs.jproteome.2c00457”).

async fetch()[source]#

Fetch the Europe PMC record matching the provided identifiers.

Returns:

The first matching Europe PMC record.

Return type:

dict

Raises:

  • EuropePMCNotFoundError – If no record matches the provided identifiers.

  • httpx.RequestError, httpx.HTTPStatusError – For network/HTTP issues.

Submodules#

europe_pmc_auth

Helper for constructing Europe PMC API request headers.

europe_pmc_ingestor

Async client for the Europe PMC API.

Dependencies diagram#

Each architecture diagram below visualizes the internal dependency structure of the bridge.services.europe_pmc package. It shows how modules and subpackages within the package depend on each other, based on direct Python imports.

  • Packages are shown as purple rectangles

  • Modules are shown as pink rectangles

  • Arrows (A → B) indicate that A directly imports B

Each subpackage’s diagram focuses only on its own internal structure, it does not include imports to or from higher-level packages (those appear in the parent package’s diagram).

bridge package dependencies
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